Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | C1I57_06785 | Not Available | Positive | 1224339 - 1224614 | 10131.2 |
| Putative tail component | C1I57_06790 | Not Available | Positive | 1224626 - 1225204 | 21558.7 |
| Minor tail protein | C1I57_06795 | Not Available | Positive | 1225201 - 1225602 | 15045.8 |
| Putative major tail subunit | C1I57_06800 | Not Available | Positive | 1225613 - 1226356 | 25743.2 |
| Minor tail protein | C1I57_06805 | Not Available | Positive | 1226417 - 1226803 | 14242.8 |
| Putative minor tail protein | C1I57_06810 | Not Available | Positive | 1226812 - 1227141 | 12350.6 |
| Tail length tape measure protein | C1I57_06815 | Not Available | Positive | 1227113 - 1230178 | 112242.0 |
| Putative minor tail protein | C1I57_06820 | Not Available | Positive | 1230178 - 1230507 | 12516.1 |
| Putative minor tail protein | C1I57_06825 | Not Available | Positive | 1230517 - 1230827 | 11577.6 |
| Integrase | C1I57_10275 | Not Available | Positive | 1887641 - 1888879 | 47318.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





