Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein cspf | C1I57_06685 | Not Available | Negative | 1211574 - 1211786 | 7563.18 |
| Csp | C1I57_06690 | Not Available | Positive | 1212087 - 1212302 | 7687.09 |
| Holin protein | C1I57_06695 | Not Available | Positive | 1213055 - 1213270 | 7882.67 |
| Hypothetical protein | C1I57_06700 | Not Available | Positive | 1213275 - 1213826 | 20848.0 |
| hypothetical protein | C1I57_06705 | Not Available | Negative | 1213774 - 1214034 | 9521.4 |
| Endolysin | C1I57_06710 | Not Available | Positive | 1214148 - 1214681 | 19595.6 |
| Phage-tail assembly-like protein | C1I57_06715 | Not Available | Positive | 1214678 - 1215175 | 18263.8 |
| Csp | C1I57_06720 | Not Available | Positive | 1215539 - 1215751 | 7684.14 |
| cold-shock protein | C1I57_06725 | Not Available | Positive | 1215762 - 1215950 | 7203.67 |
| hypothetical protein | C1I57_06730 | Not Available | Positive | 1216098 - 1216253 | 5657.77 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





