Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | C1I57_05695 | Not Available | Negative | 1041734 - 1042084 | 13143.6 |
| Lysin | C1I57_05700 | Not Available | Negative | 1042127 - 1042594 | 17453.1 |
| Endolysin | C1I57_05705 | Not Available | Negative | 1042591 - 1043124 | 19571.5 |
| Hypothetical protein | C1I57_05710 | Not Available | Negative | 1043188 - 1043538 | 13078.7 |
| Putative lysozyme | C1I57_05715 | Not Available | Negative | 1043543 - 1043758 | 7955.57 |
| pertussis toxin-like subunit arta | C1I57_05720 | Not Available | Negative | 1044310 - 1045041 | 27369.1 |
| subtilase cytotoxin subunit b | C1I57_05725 | Not Available | Negative | 1045077 - 1045484 | 15505.4 |
| Putative antitermination protein q | C1I57_05730 | Not Available | Negative | 1045798 - 1046169 | 13787.9 |
| Hypothetical protein | C1I57_05735 | Not Available | Negative | 1046187 - 1046984 | 30217.4 |
| Dna packaging protein | C1I57_05945 | Not Available | Negative | 1089187 - 1090859 | 63240.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





