Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_10440 | Not Available | Negative | 1920398 - 1920577 | 6803.32 |
| peptide-methionine (s)-s-oxide reductase msra | C1I57_10445 | Not Available | Positive | 1920634 - 1921272 | 23362.4 |
| hlyc/corc family transporter | C1I57_10450 | Not Available | Positive | 1921595 - 1922938 | 49765.6 |
| duf1107 domain-containing protein | C1I57_10455 | Not Available | Negative | 1923016 - 1923222 | 8072.24 |
| ytfj family protein | C1I57_10460 | Not Available | Positive | 1923547 - 1924104 | 20548.8 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | C1I57_10465 | Not Available | Negative | 1924094 - 1924834 | 27122.2 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | C1I57_10470 | Not Available | Positive | 1925024 - 1926967 | 70835.9 |
| transcriptional regulator | C1I57_10475 | Not Available | Negative | 1927096 - 1927476 | 14094.0 |
| nad(p)-dependent oxidoreductase | C1I57_10480 | Not Available | Positive | 1927565 - 1928058 | 17215.6 |
| formate acetyltransferase 1 | C1I57_10485 | Not Available | Negative | 1928265 - 1930547 | 85362.0 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





