Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Portal protein | C1I57_04100 | Not Available | Negative | 741732 - 742973 | 46149.0 |
| Hypothetical protein | C1I57_04105 | Not Available | Negative | 742973 - 743155 | 6407.22 |
| Large terminase subunit | C1I57_04110 | Not Available | Negative | 743167 - 744900 | 65353.6 |
| Terminase small subunit | C1I57_04115 | Not Available | Negative | 744897 - 745400 | 18275.3 |
| Hnh endonuclease | C1I57_04120 | Not Available | Negative | 745517 - 745867 | 13151.9 |
| hypothetical | C1I57_04125 | Not Available | Positive | 745970 - 746409 | 16407.4 |
| hypothetical protein | C1I57_04130 | Not Available | Negative | 746516 - 746767 | 9772.9 |
| Rz | C1I57_04135 | Not Available | Negative | 746838 - 747275 | 16102.2 |
| Endopeptidase | C1I57_04140 | Not Available | Negative | 747272 - 747748 | 17762.1 |
| Holin protein | C1I57_04145 | Not Available | Negative | 747735 - 748040 | 10837.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





