Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | C1I57_10195 | Not Available | Positive | 1868006 - 1868965 | 35853.1 |
| non-ribosomal peptide synthetase | C1I57_10200 | Not Available | Positive | 1869156 - 1873750 | 171256.0 |
| ribonuclease r | C1I57_10205 | Not Available | Negative | 1873751 - 1876011 | 85736.6 |
| transcriptional regulator | C1I57_10210 | Not Available | Negative | 1876050 - 1876475 | 15594.0 |
| adenylosuccinate synthetase | C1I57_10215 | Not Available | Negative | 1876680 - 1877978 | 47347.7 |
| duf2065 domain-containing protein | C1I57_10220 | Not Available | Negative | 1878082 - 1878279 | 7166.26 |
| protease modulator hflc | C1I57_10225 | Not Available | Negative | 1878361 - 1879365 | 37652.0 |
| protease modulator hflk | C1I57_10230 | Not Available | Negative | 1879368 - 1880627 | 45562.5 |
| gtpase hflx | C1I57_10235 | Not Available | Negative | 1880713 - 1881993 | 48315.0 |
| rna-binding protein hfq | C1I57_10240 | Not Available | Negative | 1882070 - 1882378 | 11167.0 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





