Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal rna small subunit methyltransferase a | C1I57_10090 | Not Available | Negative | 1839851 - 1840672 | 30363.9 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | C1I57_10095 | Not Available | Negative | 1840669 - 1841658 | 35265.1 |
| chaperone sura | C1I57_10100 | Not Available | Negative | 1841658 - 1842944 | 47286.5 |
| lps-assembly protein lptd | C1I57_10105 | Not Available | Negative | 1842997 - 1845351 | 89629.9 |
| dnaj-like protein djla | C1I57_10110 | Not Available | Positive | 1845606 - 1846421 | 30567.2 |
| respiratory nitrate reductase subunit gamma | C1I57_10115 | Not Available | Negative | 1846440 - 1846750 | 11889.8 |
| nitrate reductase molybdenum cofactor assembly chaperone | C1I57_10120 | Not Available | Negative | 1846750 - 1847460 | 26464.4 |
| nitrate reductase subunit beta | C1I57_10125 | Not Available | Negative | 1847457 - 1848995 | 58109.6 |
| nitrate reductase subunit alpha | C1I57_10130 | Not Available | Negative | 1849013 - 1852735 | 139798.0 |
| nitrate/nitrite transporter nark | C1I57_10135 | Not Available | Negative | 1853128 - 1854519 | 49696.3 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





