Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit alpha | C1I57_09910 | Not Available | Negative | 1813030 - 1814571 | 55225.4 |
| atp synthase subunit delta | C1I57_09915 | Not Available | Negative | 1814584 - 1815117 | 19333.3 |
| atp synthase subunit b | C1I57_09920 | Not Available | Negative | 1815132 - 1815602 | 17264.9 |
| atp synthase subunit c | C1I57_09925 | Not Available | Negative | 1815664 - 1815903 | 8256.71 |
| atp synthase subunit a | C1I57_09930 | Not Available | Negative | 1815950 - 1816765 | 30314.1 |
| atp synthase i | C1I57_09935 | Not Available | Negative | 1816774 - 1817154 | 13632.5 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | C1I57_09940 | Not Available | Negative | 1817771 - 1818394 | 23433.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | C1I57_09945 | Not Available | Negative | 1818458 - 1818733 | 10160.2 |
| hypothetical protein | C1I57_09955 | Not Available | Positive | 1818966 - 1819229 | 9889.22 |
| sis domain-containing protein | C1I57_09960 | Not Available | Positive | 1819282 - 1819905 | 22703.4 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





