Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar/pyridoxal phosphate phosphatase yigl | C1I57_09755 | Not Available | Positive | 1776273 - 1776853 | 21905.0 |
| inorganic pyrophosphatase | C1I57_09760 | Not Available | Negative | 1777067 - 1777597 | 19732.6 |
| abc transporter substrate-binding protein | C1I57_09765 | Not Available | Positive | 1777907 - 1778863 | 34314.5 |
| sugar abc transporter atp-binding protein | C1I57_09770 | Not Available | Positive | 1779003 - 1780505 | 55243.5 |
| abc transporter permease | C1I57_09775 | Not Available | Positive | 1780516 - 1781541 | 35672.3 |
| sugar abc transporter permease yjff | C1I57_09780 | Not Available | Positive | 1781528 - 1782523 | 34959.9 |
| fructose 1,6-bisphosphatase | C1I57_09785 | Not Available | Negative | 1782556 - 1783554 | 36836.0 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | C1I57_09790 | Not Available | Positive | 1783730 - 1785103 | 49882.0 |
| duf615 domain-containing protein | C1I57_09795 | Not Available | Negative | 1785261 - 1785812 | 21360.5 |
| metalloprotease pmba | C1I57_09800 | Not Available | Positive | 1785906 - 1787258 | 48388.4 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





