Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylglycerophosphatase b | C1I57_09595 | Not Available | Positive | 1745168 - 1745932 | 29047.0 |
| duf1049 domain-containing protein | C1I57_09600 | Not Available | Positive | 1746081 - 1746389 | 11340.1 |
| lps assembly protein b | C1I57_09605 | Not Available | Positive | 1746396 - 1747565 | 44533.6 |
| orotidine-5'-phosphate decarboxylase | C1I57_09610 | Not Available | Positive | 1747757 - 1748494 | 26152.5 |
| stress response translation initiation inhibitor ycih | C1I57_09615 | Not Available | Positive | 1748494 - 1748618 | 4616.42 |
| tetr/acrr family transcriptional regulator | C1I57_09620 | Not Available | Positive | 1748670 - 1749236 | 21828.5 |
| mexe family multidrug efflux rnd transporter periplasmic adaptor subunit | C1I57_09625 | Not Available | Positive | 1749385 - 1750506 | 39728.0 |
| tolc family protein | C1I57_09635 | Not Available | Positive | 1753617 - 1754990 | 49122.1 |
| bcr/cfla family drug resistance efflux transporter | C1I57_09640 | Not Available | Positive | 1754999 - 1756162 | 41366.1 |
| peptide abc transporter atp-binding protein sapf | C1I57_09645 | Not Available | Negative | 1756210 - 1757016 | 30572.5 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





