Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocase subunit tata | C1I57_09485 | Not Available | Negative | 1725241 - 1725510 | 9664.5 |
| ubiquinone biosynthesis protein ubib | C1I57_09490 | Not Available | Negative | 1725589 - 1727229 | 63220.3 |
| ubiquinone biosynthesis protein ubij | C1I57_09495 | Not Available | Negative | 1727226 - 1727831 | 22105.8 |
| ubiquinone/menaquinone biosynthesis c-methyltransferase ubie | C1I57_09500 | Not Available | Negative | 1727845 - 1728600 | 28104.8 |
| dna recombination protein rmuc | C1I57_09505 | Not Available | Negative | 1728695 - 1730122 | 54753.6 |
| iclr family transcriptional regulator | C1I57_09510 | Not Available | Positive | 1730339 - 1731106 | 28298.0 |
| carbohydrate kinase | C1I57_09515 | Not Available | Positive | 1731130 - 1732134 | 36418.7 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | C1I57_09520 | Not Available | Positive | 1732124 - 1732753 | 22350.4 |
| abc transporter substrate-binding protein | C1I57_09525 | Not Available | Positive | 1732778 - 1733752 | 34240.5 |
| tripartite tricarboxylate transporter tctb family protein | C1I57_09530 | Not Available | Positive | 1733769 - 1734275 | 18081.8 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





