Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase dcus | C1I57_09330 | Not Available | Positive | 1691288 - 1692565 | 47182.6 |
| two-component system response regulator dcur | C1I57_09335 | Not Available | Positive | 1692562 - 1693281 | 27489.9 |
| anaerobic c4-dicarboxylate transporter dcub | C1I57_09345 | Not Available | Positive | 1693852 - 1695192 | 47938.2 |
| fumarate hydratase | C1I57_09350 | Not Available | Positive | 1695270 - 1696916 | 60119.7 |
| hypothetical protein | C1I57_09355 | Not Available | Positive | 1697039 - 1697689 | 24106.3 |
| alpha-glucosidase/alpha-galactosidase | C1I57_09360 | Not Available | Negative | 1697686 - 1699041 | 50616.8 |
| hypothetical protein | C1I57_09365 | Not Available | Negative | 1699131 - 1699325 | 7359.78 |
| transcriptional regulator melr | C1I57_09370 | Not Available | Positive | 1699324 - 1700232 | 34960.9 |
| arginine decarboxylase | C1I57_09375 | Not Available | Positive | 1700431 - 1702698 | 84453.8 |
| transcriptional regulator | C1I57_09380 | Not Available | Positive | 1703034 - 1703795 | 29022.4 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





