Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | C1I57_04000 | Not Available | Negative | 727797 - 728540 | 26087.0 |
| Tail protein | C1I57_04005 | Not Available | Negative | 728544 - 729128 | 21559.5 |
| Baseplate protein | C1I57_04010 | Not Available | Negative | 729119 - 730177 | 38166.1 |
| Tail protein | C1I57_04015 | Not Available | Negative | 730164 - 730592 | 16269.5 |
| Tail protein | C1I57_04020 | Not Available | Negative | 730589 - 731137 | 19529.1 |
| Tail protein | C1I57_04025 | Not Available | Negative | 731137 - 732216 | 39193.0 |
| Tail/dna circulation protein | C1I57_04030 | Not Available | Negative | 732213 - 733583 | 49503.6 |
| Tail protein | C1I57_04035 | Not Available | Negative | 733602 - 735437 | 65374.3 |
| hypothetical protein | C1I57_04040 | Not Available | Negative | 735430 - 735612 | 7022.42 |
| Putative bacteriophage protein | C1I57_04045 | Not Available | Negative | 735579 - 735848 | 9958.99 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





