Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione-disulfide reductase | C1I57_09230 | Not Available | Positive | 1675057 - 1676409 | 48642.1 |
| damage inducible protein | C1I57_09235 | Not Available | Negative | 1676463 - 1676546 | 3021.06 |
| multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase nadr | C1I57_09240 | Not Available | Positive | 1676629 - 1676988 | 14085.6 |
| addiction module toxin rele | C1I57_09245 | Not Available | Positive | 1677080 - 1677412 | 12272.2 |
| transcriptional regulator | C1I57_09250 | Not Available | Positive | 1677414 - 1677698 | 10552.6 |
| energy-dependent translational throttle protein etta | C1I57_09255 | Not Available | Negative | 1677754 - 1679421 | 62430.5 |
| murein transglycosylase | C1I57_09260 | Not Available | Positive | 1679628 - 1681565 | 73394.2 |
| trp operon repressor | C1I57_09265 | Not Available | Positive | 1681655 - 1681981 | 12341.9 |
| non-canonical purine ntp phosphatase | C1I57_09270 | Not Available | Negative | 1682054 - 1682581 | 18811.4 |
| phosphoglycerate mutase gpmb | C1I57_09275 | Not Available | Positive | 1682633 - 1683280 | 24016.5 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





