Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate import atp-binding protein ugpc | C1I57_08915 | Not Available | Negative | 1612850 - 1613920 | 39504.3 |
| sn-glycerol 3-phosphate abc transporter permease | C1I57_08920 | Not Available | Negative | 1613922 - 1614767 | 31531.6 |
| sn-glycerol 3-phosphate abc transporter permease | C1I57_08925 | Not Available | Negative | 1614764 - 1615651 | 33249.6 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | C1I57_08930 | Not Available | Negative | 1615749 - 1616567 | 30373.9 |
| multidrug transporter mdfa | C1I57_08935 | Not Available | Negative | 1616752 - 1617984 | 44323.7 |
| undecaprenyl-diphosphate phosphatase | C1I57_08940 | Not Available | Positive | 1618269 - 1618865 | 22419.9 |
| deor family transcriptional regulator | C1I57_08945 | Not Available | Positive | 1618923 - 1619681 | 28549.5 |
| serine-type d-ala-d-ala carboxypeptidase | C1I57_08950 | Not Available | Negative | 1619728 - 1620930 | 43673.5 |
| glutathione s-transferase | C1I57_08955 | Not Available | Positive | 1621177 - 1621803 | 23714.4 |
| pqq-dependent sugar dehydrogenase | C1I57_08960 | Not Available | Negative | 1621800 - 1622915 | 41059.9 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





