Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pirin family protein | C1I57_08865 | Not Available | Negative | 1604476 - 1605171 | 26280.8 |
| oxidoreductase | C1I57_08870 | Not Available | Negative | 1605294 - 1606331 | 38724.1 |
| hypothetical protein | C1I57_08875 | Not Available | Negative | 1606365 - 1606550 | 6788.2 |
| n-acetyltransferase | C1I57_08880 | Not Available | Positive | 1606665 - 1607153 | 18772.7 |
| type vi secretion system tube protein hcp | C1I57_08885 | Not Available | Positive | 1607389 - 1608567 | 44251.9 |
| hypothetical protein | C1I57_08890 | Not Available | Positive | 1608564 - 1609058 | 19018.5 |
| hypothetical protein | C1I57_08895 | Not Available | Positive | 1609508 - 1609792 | 10489.3 |
| gamma-glutamyltransferase | C1I57_08900 | Not Available | Negative | 1609830 - 1611563 | 61630.2 |
| hypothetical protein | C1I57_08905 | Not Available | Positive | 1611683 - 1612123 | 16639.0 |
| glycerophosphodiester phosphodiesterase | C1I57_08910 | Not Available | Negative | 1612110 - 1612853 | 27335.9 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





