Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribbon-helix-helix protein, copg family | C1I57_08800 | Not Available | Positive | 1595056 - 1595304 | 9036.89 |
| replication protein repa | C1I57_08805 | Not Available | Negative | 1595377 - 1595502 | 4659.86 |
| positive regulator of repfic repa1 expression | C1I57_08810 | Not Available | Positive | 1595551 - 1595625 | 2699.38 |
| incfii family plasmid replication initiator repa | C1I57_08815 | Not Available | Positive | 1595606 - 1596475 | 33172.1 |
| hypothetical protein | C1I57_08820 | Not Available | Positive | 1596838 - 1597179 | 12304.7 |
| hypothetical protein | C1I57_08825 | Not Available | Positive | 1597408 - 1597752 | 13113.9 |
| autotransporter outer membrane beta-barrel domain-containing protein | C1I57_08845 | Not Available | Positive | 1598796 - 1601377 | 91646.2 |
| gluconate transporter | C1I57_08850 | Not Available | Negative | 1601378 - 1602718 | 46457.0 |
| gluconokinase | C1I57_08855 | Not Available | Negative | 1602722 - 1603249 | 19491.3 |
| gntr family transcriptional regulator | C1I57_08860 | Not Available | Negative | 1603388 - 1604383 | 36424.3 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





