Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ribosomal protein s15p/s13e | C1I57_03145 | Not Available | Negative | 568382 - 568738 | 13165.7 |
| C protein | C1I57_03150 | Not Available | Positive | 568843 - 569154 | 11753.9 |
| Integrase | C1I57_03155 | Not Available | Positive | 569248 - 570243 | 37934.0 |
| Attr | Not Available | Not Available | Positive | 570334 - 570346 | Not Available |
| Putative dna damage-inducible protein | C1I57_03970 | Not Available | Positive | 723581 - 723757 | 6382.38 |
| duf262 domain-containing protein | C1I57_03975 | Not Available | Positive | 724143 - 726032 | 72753.9 |
| Dna-invertase | C1I57_03980 | Not Available | Negative | 726134 - 726256 | 4548.35 |
| Tail fiber protein | C1I57_03985 | Not Available | Positive | 726286 - 726777 | 17218.2 |
| Putative tail fiber assembly protein | C1I57_03990 | Not Available | Positive | 726777 - 727379 | 21646.2 |
| Tail fiber assembly protein | C1I57_03995 | Not Available | Negative | 727351 - 727794 | 16463.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





