Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 1539174 - 1539258 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 1539282 - 1539356 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 1539391 - 1539465 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1539481 - 1539557 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 1539606 - 1539680 | Not Available |
| hypothetical protein | C1I57_08505 | Not Available | Negative | 1539681 - 1539940 | 9770.47 |
| lysr family transcriptional regulator | C1I57_08510 | Not Available | Positive | 1540045 - 1540941 | 33231.3 |
| duf805 domain-containing protein | C1I57_08515 | Not Available | Negative | 1540975 - 1541343 | 14513.9 |
| glutathione s-transferase family protein | C1I57_08520 | Not Available | Negative | 1541626 - 1542612 | 37391.1 |
| doxx family protein | C1I57_08525 | Not Available | Negative | 1542682 - 1543164 | 17218.6 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





