Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhch/yjgk/yial family protein | C1I57_08430 | Not Available | Positive | 1528617 - 1529087 | 17298.7 |
| membrane transport protein | C1I57_08435 | Not Available | Positive | 1529101 - 1530381 | 44818.9 |
| pts n-acetyl glucosamine transporter subunit iiabc | C1I57_08440 | Not Available | Negative | 1530470 - 1532416 | 68333.9 |
| glucosamine-6-phosphate deaminase | C1I57_08445 | Not Available | Positive | 1532749 - 1533549 | 29775.9 |
| n-acetylglucosamine-6-phosphate deacetylase | C1I57_08450 | Not Available | Positive | 1533609 - 1534757 | 40979.5 |
| transcriptional regulator | C1I57_08455 | Not Available | Positive | 1534766 - 1535986 | 44485.9 |
| ribonucleotide monophosphatase nagd | C1I57_08460 | Not Available | Positive | 1536034 - 1536786 | 27164.6 |
| asparagine synthetase b | C1I57_08465 | Not Available | Positive | 1537042 - 1538706 | 62662.3 |
| hypothetical protein | C1I57_08470 | Not Available | Negative | 1538849 - 1539043 | 7284.82 |
| Trna-met | Not Available | Not Available | Positive | 1539087 - 1539163 | Not Available |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





