Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Smf family protein | C1I57_03095 | Not Available | Positive | 561705 - 562688 | 36273.4 |
| hypothetical protein | C1I57_03100 | Not Available | Positive | 562681 - 563964 | 48683.1 |
| Replication protein | C1I57_03105 | Not Available | Negative | 564140 - 566395 | 85515.9 |
| Hypothetical protein | C1I57_03110 | Not Available | Negative | 566385 - 566660 | 10142.1 |
| Hypothetical protein | C1I57_03115 | Not Available | Negative | 566657 - 566881 | 8235.74 |
| Hypothetical protein | C1I57_03120 | Not Available | Negative | 566881 - 567171 | 11000.4 |
| hypothetical protein | C1I57_03125 | Not Available | Negative | 567168 - 567413 | 9389.27 |
| Hypothetical protein | C1I57_03130 | Not Available | Negative | 567428 - 567640 | 7869.42 |
| Gpb | C1I57_03135 | Not Available | Negative | 567704 - 568204 | 20084.3 |
| Hypothetical protein | C1I57_03140 | Not Available | Negative | 568201 - 568398 | 7615.66 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





