Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/serine transporter tdcc | C1I57_08005 | Not Available | Negative | 1447550 - 1448881 | 48895.8 |
| serine/threonine dehydratase | C1I57_08010 | Not Available | Negative | 1448903 - 1449892 | 35234.5 |
| transcriptional regulator tdca | C1I57_08020 | Not Available | Negative | 1449991 - 1450929 | 34598.9 |
| transcriptional regulator | C1I57_08025 | Not Available | Positive | 1451119 - 1451463 | 13526.3 |
| glycerate 2-kinase | C1I57_08035 | Not Available | Negative | 1452429 - 1453574 | 39094.7 |
| 2-hydroxy-3-oxopropionate reductase | C1I57_08040 | Not Available | Negative | 1453671 - 1454561 | 30661.6 |
| 5-keto-4-deoxy-d-glucarate aldolase | C1I57_08045 | Not Available | Negative | 1454591 - 1455361 | 27400.6 |
| mfs transporter | C1I57_08050 | Not Available | Negative | 1455377 - 1455982 | 21732.7 |
| glucose-6-phosphate isomerase | C1I57_08055 | Not Available | Negative | 1455983 - 1457292 | 48739.9 |
| lysine-sensitive aspartokinase 3 | C1I57_08065 | Not Available | Positive | 1457817 - 1459166 | 48580.6 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





