Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase family protein | C1I57_07945 | Not Available | Negative | 1435116 - 1435439 | 11900.7 |
| metal abc transporter permease | C1I57_07955 | Not Available | Negative | 1437349 - 1438206 | 30697.8 |
| hypothetical protein | C1I57_07960 | Not Available | Positive | 1438368 - 1438886 | 18975.6 |
| hypothetical protein | C1I57_07965 | Not Available | Positive | 1438909 - 1439073 | 5935.07 |
| serine dehydratase subunit alpha family protein | C1I57_07970 | Not Available | Negative | 1439205 - 1440515 | 45306.8 |
| transporter | C1I57_07975 | Not Available | Negative | 1440543 - 1441874 | 48299.6 |
| l-serine ammonia-lyase | C1I57_07985 | Not Available | Negative | 1442149 - 1443513 | 48534.6 |
| reactive intermediate/imine deaminase | C1I57_07990 | Not Available | Negative | 1443585 - 1443974 | 14008.0 |
| formate c-acetyltransferase | C1I57_07995 | Not Available | Negative | 1443988 - 1446282 | 85990.5 |
| propionate kinase | C1I57_08000 | Not Available | Negative | 1446316 - 1447524 | 43423.7 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





