Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Phage holin | C1I57_03045 | Not Available | Negative | 553565 - 553990 | 15492.7 |
| Endolysin | C1I57_03050 | Not Available | Negative | 554005 - 554502 | 18539.1 |
| Holin | C1I57_03055 | Not Available | Negative | 554502 - 554783 | 9787.61 |
| Baseplate protein x | C1I57_03060 | Not Available | Negative | 554787 - 554990 | 7083.45 |
| Head completion-stabilization protein | C1I57_03065 | Not Available | Negative | 554990 - 555499 | 19030.8 |
| Terminase endonuclease subunit | C1I57_03070 | Not Available | Negative | 555599 - 556342 | 27426.6 |
| Capsid protein | C1I57_03075 | Not Available | Negative | 556346 - 557419 | 40276.9 |
| Capsid-scaffolding protein | C1I57_03080 | Not Available | Negative | 557478 - 558332 | 31433.2 |
| Terminase atpase subunit | C1I57_03085 | Not Available | Positive | 558506 - 560278 | 66556.1 |
| Putative portal protein | C1I57_03090 | Not Available | Positive | 560278 - 561312 | 39113.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





