Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_07520 | Not Available | Positive | 1351027 - 1351245 | 8241.9 |
| tonb-dependent receptor | C1I57_07525 | Not Available | Positive | 1351331 - 1353301 | 72297.2 |
| duf4198 domain-containing protein | C1I57_07530 | Not Available | Positive | 1353320 - 1354111 | 29506.9 |
| cobalamin biosynthesis protein cobw | C1I57_07535 | Not Available | Positive | 1354375 - 1355574 | 45118.5 |
| hypothetical protein | C1I57_07555 | Not Available | Positive | 1356524 - 1357660 | 43156.1 |
| hypothetical protein | C1I57_07570 | Not Available | Negative | 1359176 - 1359535 | 13748.0 |
| 50s ribosome-binding gtpase | C1I57_07585 | Not Available | Positive | 1361207 - 1362079 | 32480.8 |
| cytoplasmic protein | C1I57_07600 | Not Available | Positive | 1365055 - 1365177 | 4669.6 |
| duf945 domain-containing protein | C1I57_07605 | Not Available | Positive | 1365198 - 1365457 | 10332.5 |
| non-ribosomal peptide synthetase | C1I57_07610 | Not Available | Positive | 1365458 - 1367047 | 59986.0 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





