Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | C1I57_07410 | Not Available | Positive | 1330688 - 1331947 | 47007.1 |
| undecaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | C1I57_07415 | Not Available | Positive | 1332187 - 1333290 | 40959.7 |
| eca polysaccharide chain length modulation protein | C1I57_07420 | Not Available | Positive | 1333302 - 1334348 | 39462.3 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | C1I57_07425 | Not Available | Positive | 1334404 - 1335534 | 42227.0 |
| udp-n-acetyl-d-mannosamine dehydrogenase | C1I57_07430 | Not Available | Positive | 1335531 - 1336793 | 45855.4 |
| dtdp-glucose 4,6-dehydratase | C1I57_07435 | Not Available | Positive | 1336793 - 1337860 | 39750.9 |
| glucose-1-phosphate thymidylyltransferase 2 | C1I57_07440 | Not Available | Positive | 1337879 - 1338760 | 32736.3 |
| dtdp-fucosamine acetyltransferase | C1I57_07445 | Not Available | Positive | 1338738 - 1339412 | 24219.7 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | C1I57_07450 | Not Available | Positive | 1339417 - 1340547 | 41965.5 |
| lipid iii flippase wzxe | C1I57_07455 | Not Available | Positive | 1340549 - 1341799 | 45050.6 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





