Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf805 domain-containing protein | C1I57_07360 | Not Available | Positive | 1323395 - 1323760 | 13660.0 |
| 4-hydroxy-tetrahydrodipicolinate reductase | C1I57_07365 | Not Available | Positive | 1323921 - 1324742 | 28786.4 |
| hypothetical protein | C1I57_07370 | Not Available | Positive | 1324848 - 1325045 | 7566.71 |
| carbamoyl-phosphate synthase small subunit | C1I57_07375 | Not Available | Positive | 1325198 - 1326346 | 41417.4 |
| carbamoyl phosphate synthase large subunit | C1I57_07380 | Not Available | Positive | 1326364 - 1328114 | 64175.0 |
| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | C1I57_07385 | Not Available | Negative | 1328115 - 1328500 | 13939.9 |
| addiction module toxin rele | C1I57_07390 | Not Available | Negative | 1328506 - 1328628 | 4447.26 |
| atp-dependent rna helicase rhlb | C1I57_07395 | Not Available | Negative | 1328636 - 1329901 | 47128.7 |
| thioredoxin trxa | C1I57_07400 | Not Available | Positive | 1330032 - 1330361 | 11749.2 |
| rho operon leader peptide | C1I57_07405 | Not Available | Positive | 1330502 - 1330603 | 3750.4 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





