Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein damx | C1I57_07110 | Not Available | Negative | 1273025 - 1274311 | 46034.1 |
| 3-dehydroquinate synthase | C1I57_07115 | Not Available | Negative | 1274403 - 1275491 | 38855.3 |
| shikimate kinase | C1I57_07120 | Not Available | Negative | 1275548 - 1276069 | 19539.2 |
| dna transporter hofq | C1I57_07125 | Not Available | Negative | 1276470 - 1277708 | 44872.0 |
| duf2531 domain-containing protein | C1I57_07130 | Not Available | Negative | 1277620 - 1278024 | 15128.1 |
| dna utilization protein hofo | C1I57_07135 | Not Available | Negative | 1278014 - 1278454 | 16923.2 |
| dna utilization protein hofn | C1I57_07140 | Not Available | Negative | 1278438 - 1278977 | 20863.3 |
| dna utilization protein hofm | C1I57_07145 | Not Available | Negative | 1278977 - 1279756 | 29092.0 |
| carboxypeptidase/penicillin-binding protein 1a | C1I57_07150 | Not Available | Positive | 1279876 - 1282428 | 93621.4 |
| adp compounds hydrolase nude | C1I57_07155 | Not Available | Negative | 1282594 - 1283154 | 21094.3 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





