Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_07060 | Not Available | Negative | 1264582 - 1264764 | 6771.16 |
| duf2773 domain-containing protein | C1I57_07065 | Not Available | Positive | 1264686 - 1264967 | 10645.8 |
| recombination-associated protein rdgc | C1I57_07070 | Not Available | Negative | 1265125 - 1266036 | 34025.3 |
| fructokinase | C1I57_07075 | Not Available | Positive | 1266161 - 1267069 | 32511.6 |
| mfs transporter araj | C1I57_07080 | Not Available | Negative | 1267338 - 1268522 | 41993.0 |
| exonuclease subunit sbcc | C1I57_07085 | Not Available | Negative | 1268648 - 1270095 | 54637.1 |
| tryptophan--trna ligase | C1I57_07090 | Not Available | Negative | 1270096 - 1270643 | 20711.8 |
| phosphoglycolate phosphatase | C1I57_07095 | Not Available | Negative | 1270636 - 1271394 | 27375.7 |
| ribulose-phosphate 3-epimerase | C1I57_07100 | Not Available | Negative | 1271387 - 1272064 | 24555.7 |
| adenine-specific dna-methyltransferase | C1I57_07105 | Not Available | Negative | 1272082 - 1272918 | 32087.2 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





