Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts glucitol/sorbitol transporter subunit iia | C1I57_06910 | Not Available | Positive | 1241802 - 1242173 | 13265.7 |
| sorbitol 6-phosphate dehydrogenase | C1I57_06915 | Not Available | Positive | 1242177 - 1242956 | 27813.4 |
| transcriptional regulator gutm | C1I57_06920 | Not Available | Positive | 1243062 - 1243421 | 12982.1 |
| transcriptional regulator | C1I57_06925 | Not Available | Positive | 1243488 - 1244261 | 28207.8 |
| arabinose 5-phosphate isomerase gutq | C1I57_06930 | Not Available | Positive | 1244254 - 1245219 | 34071.7 |
| norr family transcriptional regulator | C1I57_06935 | Not Available | Negative | 1245216 - 1246730 | 55201.6 |
| anaerobic nitric oxide reductase flavorubredoxin | C1I57_06940 | Not Available | Positive | 1246917 - 1248356 | 54146.9 |
| nadh:flavorubredoxin reductase norw | C1I57_06945 | Not Available | Positive | 1248353 - 1249486 | 41439.2 |
| carbamoyltransferase hypf | C1I57_06950 | Not Available | Negative | 1249710 - 1250504 | 28210.8 |
| hydrogen peroxide resistance inhibitor ipra | C1I57_06955 | Not Available | Positive | 1250522 - 1251145 | 23929.1 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





