Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nicotinamide nucleotide adenylyltransferase | C1I57_06605 | Not Available | Positive | 1199099 - 1199740 | 24561.4 |
| adenosylcobalamin/alpha-ribazole phosphatase | C1I57_06610 | Not Available | Positive | 1199764 - 1200375 | 23418.8 |
| ribosome silencing factor rsfs | C1I57_06615 | Not Available | Positive | 1200635 - 1200952 | 11582.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | C1I57_06620 | Not Available | Positive | 1200956 - 1201423 | 17342.1 |
| penicillin-binding protein 2 | C1I57_06625 | Not Available | Positive | 1201454 - 1203355 | 70860.6 |
| rod shape-determining protein roda | C1I57_06630 | Not Available | Positive | 1203358 - 1204470 | 40492.6 |
| endolytic peptidoglycan transglycosylase rlpa | C1I57_06635 | Not Available | Positive | 1204481 - 1205569 | 37554.1 |
| d-alanyl-d-alanine carboxypeptidase | C1I57_06640 | Not Available | Positive | 1205709 - 1206920 | 44446.5 |
| hypothetical protein | C1I57_06645 | Not Available | Positive | 1207030 - 1207293 | 9827.92 |
| octanoyltransferase | C1I57_06650 | Not Available | Positive | 1207394 - 1208035 | 23884.0 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





