Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 538477 - 538489 | Not Available |
| Putative positive regulator of late gene transcription | C1I57_02950 | Not Available | Negative | 538602 - 538856 | 9656.61 |
| Tail protein | C1I57_02955 | Not Available | Negative | 538902 - 540065 | 42673.9 |
| Tail protein | C1I57_02960 | Not Available | Negative | 540065 - 540544 | 17439.2 |
| Tail length determinator | C1I57_02965 | Not Available | Negative | 540559 - 543006 | 86539.8 |
| Putative phage tail protein | C1I57_02970 | Not Available | Negative | 542999 - 543118 | 4560.46 |
| Tail protein | C1I57_02975 | Not Available | Negative | 543151 - 543426 | 9664.92 |
| Tail tube protein | C1I57_02980 | Not Available | Negative | 543483 - 544001 | 19051.8 |
| Phage tail sheath protein fi | C1I57_02985 | Not Available | Negative | 544014 - 545204 | 43094.0 |
| lysogenic conversion protein | C1I57_02990 | Not Available | Negative | 545534 - 546127 | 23094.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





