Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate abc transporter substrate-binding protein | C1I57_06350 | Not Available | Positive | 1154754 - 1155341 | 21465.8 |
| formate dehydrogenase-n subunit alpha | C1I57_06355 | Not Available | Positive | 1155390 - 1157801 | 89753.7 |
| formate dehydrogenase subunit beta | C1I57_06360 | Not Available | Positive | 1157814 - 1158698 | 32159.3 |
| formate dehydrogenase cytochrome b556 subunit | C1I57_06365 | Not Available | Positive | 1158691 - 1159344 | 25351.9 |
| transcriptional regulator | C1I57_06370 | Not Available | Negative | 1159573 - 1159857 | 10401.7 |
| killer protein | C1I57_06375 | Not Available | Negative | 1159857 - 1160135 | 10537.8 |
| alcohol dehydrogenase adhp | C1I57_06380 | Not Available | Negative | 1160321 - 1161331 | 35369.6 |
| nad-dependent malic enzyme | C1I57_06385 | Not Available | Negative | 1161465 - 1163162 | 63176.0 |
| stationary-phase-induced ribosome-associated protein | C1I57_06390 | Not Available | Negative | 1163319 - 1163456 | 5096.13 |
| protein bdm | C1I57_06395 | Not Available | Negative | 1163558 - 1163773 | 7988.24 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





