Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate abc transporter | C1I57_06190 | Not Available | Negative | 1121995 - 1123281 | 45584.0 |
| faa hydrolase family protein | C1I57_06195 | Not Available | Negative | 1123372 - 1124253 | 32525.6 |
| dihydrodipicolinate synthase family protein | C1I57_06200 | Not Available | Negative | 1124525 - 1125451 | 33707.6 |
| laci family dna-binding transcriptional regulator | C1I57_06205 | Not Available | Negative | 1125691 - 1126719 | 36873.2 |
| hypothetical protein | C1I57_06210 | Not Available | Negative | 1126716 - 1126910 | 7261.89 |
| mfs transporter | C1I57_06215 | Not Available | Positive | 1127147 - 1128544 | 51241.1 |
| porin | C1I57_06220 | Not Available | Positive | 1128667 - 1130010 | 50129.9 |
| hypothetical protein | C1I57_06225 | Not Available | Negative | 1130066 - 1130260 | 7039.71 |
| oligopeptide abc transporter atp-binding protein oppf | C1I57_06230 | Not Available | Negative | 1130261 - 1131105 | 31513.8 |
| oligopeptide abc transporter atp-binding protein oppd | C1I57_06235 | Not Available | Negative | 1131102 - 1132115 | 37166.7 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





