Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1480 domain-containing protein | C1I57_05595 | Not Available | Negative | 1024524 - 1024760 | 8753.26 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | C1I57_05600 | Not Available | Negative | 1024878 - 1025042 | 5993.19 |
| glutamate racemase | C1I57_05745 | Not Available | Negative | 1047420 - 1048277 | 31219.9 |
| tonb-dependent vitamin b12 receptor btub | C1I57_05750 | Not Available | Negative | 1048222 - 1050066 | 68418.8 |
| trna (uridine(54)-c5)-methyltransferase trma | C1I57_05755 | Not Available | Positive | 1050435 - 1051535 | 41938.4 |
| hypothetical protein | C1I57_05760 | Not Available | Negative | 1051575 - 1051934 | 13024.3 |
| tetr family transcriptional regulator | C1I57_05765 | Not Available | Negative | 1051934 - 1052581 | 24435.4 |
| mfs transporter | C1I57_05770 | Not Available | Negative | 1052688 - 1054004 | 47111.5 |
| amidohydrolase | C1I57_05775 | Not Available | Negative | 1054047 - 1055213 | 42166.6 |
| si-specific nad(p)(+) transhydrogenase | C1I57_05780 | Not Available | Positive | 1055543 - 1056943 | 51576.4 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





