Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein dd-endopeptidase mepm | C1I57_05495 | Not Available | Positive | 1004908 - 1006230 | 49060.6 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | C1I57_05500 | Not Available | Positive | 1006349 - 1007320 | 37440.6 |
| pyruvate kinase | C1I57_05505 | Not Available | Negative | 1007452 - 1008894 | 51374.3 |
| murr/rpir family transcriptional regulator | C1I57_05510 | Not Available | Negative | 1009022 - 1009891 | 31989.4 |
| glucose-6-phosphate 1-dehydrogenase | C1I57_05515 | Not Available | Positive | 1010229 - 1011704 | 55707.5 |
| phosphogluconate dehydratase | C1I57_05520 | Not Available | Positive | 1011939 - 1013750 | 64669.9 |
| khg/kdpg aldolase | C1I57_05525 | Not Available | Positive | 1013787 - 1014428 | 22285.3 |
| phosphoribosylglycinamide formyltransferase 2 | C1I57_05530 | Not Available | Negative | 1014484 - 1015662 | 42443.2 |
| damage-inducible protein yebg | C1I57_05535 | Not Available | Positive | 1015796 - 1016086 | 10717.5 |
| protein yebf | C1I57_05540 | Not Available | Positive | 1016153 - 1016509 | 12904.3 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





