Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transporter | C1I57_05195 | Not Available | Negative | 960861 - 961334 | 17322.0 |
| dna-binding transcriptional regulator kdgr | C1I57_05200 | Not Available | Negative | 961436 - 962284 | 31083.5 |
| 3-dehydro-l-gulonate 2-dehydrogenase | C1I57_05205 | Not Available | Positive | 962485 - 963483 | 36530.8 |
| yhch/yjgk/yial family protein | C1I57_05210 | Not Available | Positive | 963495 - 963959 | 17390.9 |
| duf4862 domain-containing protein | C1I57_05215 | Not Available | Positive | 963982 - 964902 | 34477.9 |
| 2,3-diketo-l-gulonate trap transporter small permease yiam | C1I57_05220 | Not Available | Positive | 965016 - 965483 | 17212.6 |
| l-dehydroascorbate transporter large permease subunit | C1I57_05225 | Not Available | Positive | 965486 - 966763 | 45332.0 |
| trap transporter substrate-binding protein | C1I57_05230 | Not Available | Positive | 966776 - 967762 | 36000.2 |
| carbohydrate kinase | C1I57_05235 | Not Available | Positive | 967766 - 969262 | 55141.0 |
| 3-dehydro-l-gulonate-6-phosphate decarboxylase ulad | C1I57_05240 | Not Available | Positive | 969259 - 969921 | 23534.2 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





