Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitoxin cptb | C1I57_05145 | Not Available | Negative | 948698 - 948964 | 10547.7 |
| pp_01020 | C1I57_05150 | Not Available | Positive | 949207 - 950187 | Not Available |
| hemolysin iii family protein | C1I57_05155 | Not Available | Negative | 950264 - 950923 | 23848.2 |
| asch domain-containing protein | C1I57_05160 | Not Available | Negative | 951087 - 951398 | 11964.1 |
| 6-phospho-beta-glucosidase | C1I57_05165 | Not Available | Positive | 951437 - 952876 | 55224.4 |
| glycine dehydrogenase (aminomethyl-transferring) | C1I57_05170 | Not Available | Negative | 953042 - 955357 | 84267.4 |
| hypothetical protein | C1I57_05175 | Not Available | Positive | 955358 - 955996 | 24110.4 |
| protein bax | C1I57_05180 | Not Available | Negative | 956104 - 956928 | 30869.3 |
| alpha-amylase | C1I57_05185 | Not Available | Positive | 957248 - 959278 | 75810.6 |
| valine--pyruvate transaminase | C1I57_05190 | Not Available | Positive | 959456 - 960709 | 46714.9 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





