Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Major capsid protein, p2 family | C1I57_02335 | Not Available | Negative | 422094 - 423152 | 39152.4 |
| Gpo family capsid scaffolding protein | C1I57_02340 | Not Available | Negative | 423169 - 424002 | 30587.8 |
| Terminase atpase subunit family protein | C1I57_02345 | Not Available | Positive | 424145 - 425911 | 67036.4 |
| Portal protein | C1I57_02350 | Not Available | Positive | 425911 - 426960 | 39741.6 |
| hypothetical protein | C1I57_02355 | Not Available | Negative | 427013 - 427684 | 25549.5 |
| ntpase kap | C1I57_02360 | Not Available | Negative | 428209 - 430101 | 73416.2 |
| Dna damage inducible protein | C1I57_02365 | Not Available | Negative | 430423 - 430728 | 11944.4 |
| Hypothetical protein | C1I57_02370 | Not Available | Negative | 430667 - 430855 | 7286.72 |
| Replication endonuclease | C1I57_02375 | Not Available | Negative | 431009 - 433423 | 92230.3 |
| Dna adenine methyltransferase | C1I57_02380 | Not Available | Negative | 433420 - 434277 | 32180.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





