Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine cyclo-ligase | C1I57_04790 | Not Available | Positive | 869010 - 870047 | 36904.3 |
| phosphoribosylglycinamide formyltransferase | C1I57_04795 | Not Available | Positive | 870047 - 870685 | 23283.7 |
| polyphosphate kinase 1 | C1I57_04800 | Not Available | Positive | 870857 - 872923 | 80426.1 |
| exopolyphosphatase | C1I57_04805 | Not Available | Positive | 872928 - 874469 | 58139.5 |
| sensor domain-containing phosphodiesterase | C1I57_04810 | Not Available | Negative | 874508 - 876751 | 85669.8 |
| hypothetical protein | C1I57_04815 | Not Available | Negative | 876933 - 877085 | 5662.86 |
| duf2633 domain-containing protein | C1I57_04820 | Not Available | Positive | 877103 - 877294 | 7462.05 |
| succinate dehydrogenase | C1I57_04825 | Not Available | Positive | 877356 - 877502 | 6071.75 |
| hypothetical protein | C1I57_04830 | Not Available | Positive | 877605 - 878123 | 17690.1 |
| hypothetical protein | C1I57_04835 | Not Available | Positive | 878139 - 878678 | 20245.4 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





