Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamc | C1I57_04735 | Not Available | Negative | 859418 - 860452 | 36867.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | C1I57_04740 | Not Available | Negative | 860469 - 861347 | 31285.9 |
| glycine cleavage system transcriptional repressor | C1I57_04745 | Not Available | Positive | 861493 - 862065 | 20769.8 |
| peroxiredoxin | C1I57_04750 | Not Available | Positive | 862065 - 862535 | 17634.9 |
| ai-2e family transporter | C1I57_04755 | Not Available | Negative | 862634 - 863695 | 39151.8 |
| beta-barrel assembly-enhancing protease | C1I57_04760 | Not Available | Positive | 863908 - 865371 | 53907.1 |
| arsenate reductase (glutaredoxin) | C1I57_04765 | Not Available | Positive | 865392 - 865751 | 13417.4 |
| dnaa inactivator hda | C1I57_04770 | Not Available | Negative | 865889 - 866635 | 28371.4 |
| uracil/xanthine transporter | C1I57_04775 | Not Available | Negative | 866685 - 867974 | 45095.1 |
| uracil phosphoribosyltransferase | C1I57_04780 | Not Available | Negative | 868060 - 868686 | 22534.6 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





