Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate abc transporter permease | C1I57_04685 | Not Available | Negative | 849604 - 850479 | 32539.6 |
| sulfate/thiosulfate abc transporter permease cyst | C1I57_04690 | Not Available | Negative | 850479 - 851312 | 30346.6 |
| sulfate abc transporter substrate-binding protein | C1I57_04695 | Not Available | Negative | 851312 - 852328 | 37672.7 |
| nad(p)-dependent oxidoreductase | C1I57_04700 | Not Available | Negative | 852486 - 853277 | 27865.7 |
| n-acetylmuramic acid 6-phosphate etherase | C1I57_04705 | Not Available | Positive | 853557 - 854453 | 31106.7 |
| pts n-acetylmuramic acid transporter subunits iibc | C1I57_04710 | Not Available | Positive | 854457 - 855881 | 49876.0 |
| peroxidase | C1I57_04715 | Not Available | Negative | 856059 - 856229 | 6376.77 |
| trna cytosine(34) acetyltransferase tmca | C1I57_04720 | Not Available | Negative | 856230 - 857446 | 45096.9 |
| neutral zinc metallopeptidase | C1I57_04725 | Not Available | Negative | 857461 - 858324 | 31462.0 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | C1I57_04730 | Not Available | Negative | 858492 - 859205 | 26996.5 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





