Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 831152 - 831227 | Not Available |
| lysr family transcriptional regulator | C1I57_04590 | Not Available | Negative | 831338 - 832222 | 33608.4 |
| xapx domain-containing protein | C1I57_04595 | Not Available | Negative | 832263 - 832421 | 5691.39 |
| nucleoside permease | C1I57_04600 | Not Available | Negative | 832474 - 833730 | 46150.4 |
| xanthosine phosphorylase | C1I57_04605 | Not Available | Negative | 833791 - 834624 | 29912.4 |
| hypothetical protein | C1I57_04610 | Not Available | Positive | 834873 - 835637 | 29238.6 |
| lysr family transcriptional regulator | C1I57_04615 | Not Available | Negative | 835676 - 836602 | 33891.0 |
| bile acid:sodium symporter | C1I57_04620 | Not Available | Positive | 836692 - 837690 | 36377.8 |
| hypothetical protein | C1I57_04625 | Not Available | Negative | 837687 - 837905 | 8415.57 |
| dna ligase | C1I57_04630 | Not Available | Negative | 837907 - 839922 | 73632.3 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





