Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Virion morphogenesis protein | C1I57_02285 | Not Available | Negative | 418195 - 418641 | 17241.9 |
| Tail protein | C1I57_02290 | Not Available | Negative | 418634 - 419065 | 16072.0 |
| P2 lysc-like protein | C1I57_02295 | Not Available | Negative | 419028 - 419231 | 7282.64 |
| Lysb familyglysis regulatory protein | C1I57_02300 | Not Available | Negative | 419161 - 419589 | 15837.8 |
| Hypothetical protein | C1I57_02305 | Not Available | Negative | 419586 - 419963 | 14060.0 |
| Lysozyme | C1I57_02310 | Not Available | Negative | 419965 - 420438 | 17297.8 |
| Holin | C1I57_02315 | Not Available | Negative | 420458 - 420673 | 8113.98 |
| Tail protein x | C1I57_02320 | Not Available | Negative | 420677 - 420880 | 7592.02 |
| Head completion/stabilization protein | C1I57_02325 | Not Available | Negative | 420880 - 421344 | 17714.8 |
| Terminase endonuclease subunit | C1I57_02330 | Not Available | Negative | 421440 - 422090 | 23776.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





