Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_04480 | Not Available | Positive | 810556 - 811860 | 46179.5 |
| cell division protein ftsp | C1I57_04485 | Not Available | Negative | 811931 - 813343 | 51834.1 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | C1I57_04490 | Not Available | Negative | 813418 - 814155 | 27424.7 |
| dna topoisomerase iv subunit a | C1I57_04495 | Not Available | Negative | 814390 - 816648 | 83820.3 |
| abc transporter substrate-binding protein | C1I57_04500 | Not Available | Negative | 816786 - 818393 | 60798.2 |
| transcriptional regulator | C1I57_04505 | Not Available | Negative | 818502 - 818984 | 17916.4 |
| tigr00156 family protein | C1I57_04510 | Not Available | Negative | 819037 - 819429 | 14011.5 |
| two-component system response regulator qseb | C1I57_04515 | Not Available | Positive | 819581 - 820240 | 24675.1 |
| two-component system sensor histidine kinase qsec | C1I57_04520 | Not Available | Positive | 820237 - 821586 | 50305.7 |
| duf2645 domain-containing protein | C1I57_04525 | Not Available | Negative | 821632 - 821964 | 13244.7 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





