Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial biogenesis outer membrane usher protein | C1I57_04215 | Not Available | Positive | 763091 - 765571 | 92370.3 |
| adhesin | C1I57_04220 | Not Available | Positive | 765587 - 766621 | 36941.0 |
| nickel/cobalt homeostasis protein rcnb | C1I57_04225 | Not Available | Negative | 766703 - 767041 | 12466.8 |
| nickel/cobalt efflux protein rcna | C1I57_04230 | Not Available | Negative | 767260 - 768084 | 30445.2 |
| transcriptional regulator | C1I57_04235 | Not Available | Positive | 768205 - 768477 | 10134.5 |
| hydroxyethylthiazole kinase | C1I57_04240 | Not Available | Positive | 768700 - 769488 | 27312.7 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | C1I57_04245 | Not Available | Positive | 769485 - 770285 | 28644.3 |
| glycoside hydrolase family 25 protein | C1I57_04250 | Not Available | Positive | 770350 - 771168 | 31762.0 |
| gntr family transcriptional regulator | C1I57_04255 | Not Available | Positive | 771220 - 771966 | 28294.8 |
| sugar kinase | C1I57_04260 | Not Available | Negative | 771940 - 772905 | 34436.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





