Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbria adhesin ecpd | C1I57_03895 | Not Available | Positive | 711766 - 713409 | 59964.1 |
| fimbrial chaperone ecpe | C1I57_03900 | Not Available | Positive | 713378 - 714088 | 26621.7 |
| ykgj family cysteine cluster protein | C1I57_03905 | Not Available | Positive | 714401 - 714730 | 11830.0 |
| hypothetical protein | C1I57_03915 | Not Available | Negative | 714979 - 715593 | 23014.1 |
| hypothetical protein | C1I57_03920 | Not Available | Negative | 715808 - 715993 | 6723.26 |
| immunoglobulin a1 protease | C1I57_03935 | Not Available | Positive | 717703 - 720281 | 91505.5 |
| hypothetical protein | C1I57_03945 | Not Available | Negative | 720360 - 720614 | 9769.1 |
| hypothetical protein | C1I57_03950 | Not Available | Positive | 720744 - 720941 | 7138.73 |
| malate dehydrogenase | C1I57_03955 | Not Available | Positive | 720938 - 721726 | 30082.6 |
| hypothetical protein | C1I57_03960 | Not Available | Negative | 721814 - 722107 | 10831.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





