Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | C1I57_03835 | Not Available | Positive | 702636 - 703556 | 33235.6 |
| nadh:flavin oxidoreductase | C1I57_03840 | Not Available | Positive | 703728 - 704870 | 41854.2 |
| hypothetical protein | C1I57_03845 | Not Available | Positive | 705344 - 705445 | 3998.07 |
| 50s ribosomal protein l31 type b | C1I57_03855 | Not Available | Positive | 705810 - 706073 | 9920.71 |
| 50s ribosomal protein l36 | C1I57_03860 | Not Available | Positive | 706073 - 706213 | 5466.94 |
| hypothetical protein | C1I57_03870 | Not Available | Positive | 706620 - 706844 | 8338.21 |
| helix-turn-helix transcriptional regulator | C1I57_03875 | Not Available | Positive | 707249 - 707839 | 23300.1 |
| common pilus major fimbrillin subunit ecpa | C1I57_03880 | Not Available | Positive | 707913 - 708500 | 20082.4 |
| fimbrial chaperone ecpb | C1I57_03885 | Not Available | Positive | 708557 - 709225 | 24502.3 |
| hypothetical protein | C1I57_03890 | Not Available | Positive | 709251 - 711776 | 91354.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





