Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Abc transporter | E1729_02560 | Not Available | Positive | 562073 - 562825 | 27705.8 |
| Helix-turn-helix transcriptional regulator | E1729_02565 | Not Available | Positive | 563055 - 563777 | 28036.8 |
| duf2594 family protein | E1729_02570 | Not Available | Negative | 563845 - 564069 | 8239.04 |
| hypothetical protein | E1729_02575 | Not Available | Negative | 564056 - 564232 | 6795.52 |
| two-component system response regulator uvry | E1729_02580 | Not Available | Positive | 564528 - 565184 | 23864.1 |
| Hypothetical protein | E1729_02585 | Not Available | Positive | 565181 - 567013 | 68192.0 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | E1729_02590 | Not Available | Positive | 567070 - 567618 | 20701.7 |
| Trna,type:gly,anti_codon:gcc; | Not Available | Not Available | Positive | 567770 - 567845 | Not Available |
| Trna,type:cys,anti_codon:gca; | Not Available | Not Available | Positive | 567899 - 567972 | Not Available |
| Trna,type:leu,anti_codon:taa; | Not Available | Not Available | Positive | 567985 - 568071 | Not Available |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Catheter-associated urinary tract infection | Causes | PMC2900259 |
| Cauti | Causes | PMC2900259 |
| Hemorrhagic colitis | Causes | PMC9731836 |
| Hemolytic and uremic syndrome (hus) | Causes | PMC9731836 |
| Infection in the urinary tract | Causes | PMC10160630 |
| Infection in other extraintestinal sites | Causes | PMC10160630 |
| Haemolytic uraemic syndrome | Causes | PMC11542628 |
| Hus | Causes | PMC11542628 |
| Sepsis | Causes | PMC12660362 |
| Bacteraemia | Causes | PMC12660362 |





