Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | NUBRI-E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290282 bp
Thymine Count
1291497 bp
Guanine Count
1342139 bp
Cytosine Count
1315095 bp
Genome Length
5239013 bp
Protein-coding Genes
4761 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-nitroimidazole transporter | E1729_03485 | Not Available | Negative | 718423 - 719604 | 41250.8 |
| arac family transcriptional regulator | E1729_03490 | Not Available | Positive | 719701 - 720522 | 30600.4 |
| duf441 domain-containing protein | E1729_03495 | Not Available | Negative | 720479 - 720925 | 15256.6 |
| hypothetical protein | E1729_03500 | Not Available | Positive | 721095 - 721199 | 3743.71 |
| mischarged aminoacyl-trna deacylase | E1729_03505 | Not Available | Negative | 721200 - 721703 | 17850.7 |
| ggdef domain-containing protein | E1729_03510 | Not Available | Negative | 721746 - 723236 | 56674.9 |
| ggdef domain-containing protein | E1729_03515 | Not Available | Negative | 723417 - 724892 | 56039.6 |
| yeah/yhbh family protein | E1729_03520 | Not Available | Negative | 725039 - 726322 | 49453.2 |
| prka family serine protein kinase | E1729_03525 | Not Available | Negative | 726435 - 728369 | 74484.3 |
| mlta-interacting protein | E1729_03530 | Not Available | Positive | 728805 - 729551 | 27832.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





